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Cluster: HRGMv2_2871_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2871_25 HRGMv2_2871_25_1 384 2255 - GH127
TF HRGMv2_2871_25 HRGMv2_2871_25_2 2373 3167 + HTH_AraC | HTH_AraC
TC HRGMv2_2871_25 HRGMv2_2871_25_3 3419 4597 + 3.A.1.4.10
TC HRGMv2_2871_25 HRGMv2_2871_25_4 4691 5572 + 3.A.1.4.10
TC HRGMv2_2871_25 HRGMv2_2871_25_5 5576 6601 + 3.A.1.4.8
TC HRGMv2_2871_25 HRGMv2_2871_25_6 6604 7362 + 3.A.1.4.10
TC HRGMv2_2871_25 HRGMv2_2871_25_7 7379 8092 + 3.A.1.4.10
Gene ID: HRGMv2_2871_25_1
Type: CAZyme
Location: 384 - 2255 (-)
Gene ID: HRGMv2_2871_25_2
Type: TF
Location: 2373 - 3167 (+)
Gene ID: HRGMv2_2871_25_3
Type: TC
Location: 3419 - 4597 (+)
Gene ID: HRGMv2_2871_25_4
Type: TC
Location: 4691 - 5572 (+)
Gene ID: HRGMv2_2871_25_5
Type: TC
Location: 5576 - 6601 (+)
Gene ID: HRGMv2_2871_25_6
Type: TC
Location: 6604 - 7362 (+)
Gene ID: HRGMv2_2871_25_7
Type: TC
Location: 7379 - 8092 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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