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Cluster: HRGMv2_2871_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2871_13 HRGMv2_2871_13_33 40340 41287 + 3.A.1.1.17
TC HRGMv2_2871_13 HRGMv2_2871_13_34 41287 42303 + 3.A.1.1.45
CAZyme HRGMv2_2871_13 HRGMv2_2871_13_35 42332 43726 + GH30_4
CAZyme HRGMv2_2871_13 HRGMv2_2871_13_36 43794 45287 + GH30_4
CAZyme HRGMv2_2871_13 HRGMv2_2871_13_37 45238 47082 + GH30_4
NULL(UNKNOWN) HRGMv2_2871_13 HRGMv2_2871_13_38 47217 48806 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2871_13 HRGMv2_2871_13_39 48872 49966 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2871_13 HRGMv2_2871_13_40 49979 51643 + CE20
Gene ID: HRGMv2_2871_13_33
Type: TC
Location: 40340 - 41287 (+)
Gene ID: HRGMv2_2871_13_34
Type: TC
Location: 41287 - 42303 (+)
Gene ID: HRGMv2_2871_13_35
Type: CAZyme
Location: 42332 - 43726 (+)
Gene ID: HRGMv2_2871_13_36
Type: CAZyme
Location: 43794 - 45287 (+)
Gene ID: HRGMv2_2871_13_37
Type: CAZyme
Location: 45238 - 47082 (+)
Gene ID: HRGMv2_2871_13_38
Type:
Location: 47217 - 48806 (+)
Gene ID: HRGMv2_2871_13_39
Type:
Location: 48872 - 49966 (+)
Gene ID: HRGMv2_2871_13_40
Type: CAZyme
Location: 49979 - 51643 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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