dbCAN Logo

Cluster: HRGMv2_2871_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2871_8 HRGMv2_2871_8_35 46377 47261 + 3.A.1.1.34
TC HRGMv2_2871_8 HRGMv2_2871_8_36 47284 48153 + 3.A.1.1.20
STP HRGMv2_2871_8 HRGMv2_2871_8_37 48167 50212 + TPR_1
pfam HRGMv2_2871_8 HRGMv2_2871_8_38 50196 52481 + DUF5696
TC HRGMv2_2871_8 HRGMv2_2871_8_39 52489 53433 + 3.A.1.1.11
TC HRGMv2_2871_8 HRGMv2_2871_8_40 53548 54546 + 3.A.1.1.20
TF HRGMv2_2871_8 HRGMv2_2871_8_41 54674 55666 + LacI
CAZyme HRGMv2_2871_8 HRGMv2_2871_8_42 55679 57475 + GH2
CAZyme HRGMv2_2871_8 HRGMv2_2871_8_43 57641 59152 + GH43_33
Gene ID: HRGMv2_2871_8_35
Type: TC
Location: 46377 - 47261 (+)
Gene ID: HRGMv2_2871_8_36
Type: TC
Location: 47284 - 48153 (+)
Gene ID: HRGMv2_2871_8_37
Type: STP
Location: 48167 - 50212 (+)
Gene ID: HRGMv2_2871_8_38
Type: pfam
Location: 50196 - 52481 (+)
Gene ID: HRGMv2_2871_8_39
Type: TC
Location: 52489 - 53433 (+)
Gene ID: HRGMv2_2871_8_40
Type: TC
Location: 53548 - 54546 (+)
Gene ID: HRGMv2_2871_8_41
Type: TF
Location: 54674 - 55666 (+)
Gene ID: HRGMv2_2871_8_42
Type: CAZyme
Location: 55679 - 57475 (+)
Gene ID: HRGMv2_2871_8_43
Type: CAZyme
Location: 57641 - 59152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List