Genome Details
Selected Rep_genome_ID: HRGMv2_2743
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UBA738
Species
UBA738 sp003522945
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B38.bin_48 | 2,493,252 | 90.6% | 0.67% | China(Inner Mongolia) | Asia | IMGG |
| CGMR001020 | 2,361,035 | 92.28% | 0% | China | Asia | CGMR |
| HRGMv2_2743 | 2,379,597 | 92.39% | 0% | UK | Europe | HRGM |
| MGYG000004137 | 2,262,929 | 90.6% | 0% | United Kingdom | Europe | UHGG |
| Rep_3165 | 2,541,763 | 90.4362% | 0.671141% | NA | NA | WIS |
| SW208_bin.77 | 2,236,589 | 90.6% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2743_CGC5 | CGCFAM_00005 | Yes | 8 | 4 | |
| HRGMv2_2743_CGC15 | CGCFAM_00008 | Yes | 7 | 4 | |
| HRGMv2_2743_CGC2 | CGCFAM_00037 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2743_CGC4 | CGCFAM_00115 | Yes | 4 | 1 | |
| HRGMv2_2743_CGC16 | CGCFAM_00139 | Yes | 3 | 1 | |
| HRGMv2_2743_CGC7 | CGCFAM_00153 | Yes | 6 | 1 | |
| HRGMv2_2743_CGC21 | CGCFAM_00430 | Yes | 6 | 2 | |
| HRGMv2_2743_CGC17 | CGCFAM_01699 | Yes | 5 | 1 | |
| HRGMv2_2743_CGC1 | CGCFAM_02005 | Yes | 6 | 1 | |
| HRGMv2_2743_CGC12 | CGCFAM_03362 | Yes | 4 | 1 | |
| HRGMv2_2743_CGC13 | CGCFAM_03452 | Yes | 5 | 1 | |
| HRGMv2_2743_CGC14 | CGCFAM_04070 | Yes | 3 | 1 | |
| HRGMv2_2743_CGC20 | CGCFAM_04443 | Yes | 6 | 1 | |
| HRGMv2_2743_CGC3 | CGCFAM_04451 | Yes | 3 | 2 |
Top CAZyme Families