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Cluster: HRGMv2_2743_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2743_6 HRGMv2_2743_6_49 56789 57670 - GT14
CAZyme HRGMv2_2743_6 HRGMv2_2743_6_50 57667 58656 - GT14
NULL(UNKNOWN) HRGMv2_2743_6 HRGMv2_2743_6_51 58722 60632 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2743_6 HRGMv2_2743_6_52 60754 62145 + 9.B.18.1.3
peptidase HRGMv2_2743_6 HRGMv2_2743_6_53 62269 63906 - M56.UPW
TF HRGMv2_2743_6 HRGMv2_2743_6_54 63903 64274 - Pencillinase_R
CAZyme HRGMv2_2743_6 HRGMv2_2743_6_55 64459 65283 + GT2
CAZyme HRGMv2_2743_6 HRGMv2_2743_6_56 65280 66401 + GT4
Gene ID: HRGMv2_2743_6_49
Type: CAZyme
Location: 56789 - 57670 (-)
Gene ID: HRGMv2_2743_6_50
Type: CAZyme
Location: 57667 - 58656 (-)
Gene ID: HRGMv2_2743_6_51
Type:
Location: 58722 - 60632 (+)
Gene ID: HRGMv2_2743_6_52
Type: TC
Location: 60754 - 62145 (+)
Gene ID: HRGMv2_2743_6_53
Type: peptidase
Location: 62269 - 63906 (-)
Gene ID: HRGMv2_2743_6_54
Type: TF
Location: 63903 - 64274 (-)
Gene ID: HRGMv2_2743_6_55
Type: CAZyme
Location: 64459 - 65283 (+)
Gene ID: HRGMv2_2743_6_56
Type: CAZyme
Location: 65280 - 66401 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2743_6_49 vegetarian > vegan 1.23197 0.00360
HRGMv2_2743_6_51 vegetarian > vegan 1.10104 0.00360

🧭 Explore Read Mapping of CGC

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