Cluster: HRGMv2_2743_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2743
- CGC Family ID: CGCFAM_03452
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2743_17 | HRGMv2_2743_17_5 | 3924 | 5756 | + | 3.A.1.111.2 |
| TC | HRGMv2_2743_17 | HRGMv2_2743_17_6 | 5743 | 7614 | + | 3.A.1.106.1 |
| NULL(UNKNOWN) | HRGMv2_2743_17 | HRGMv2_2743_17_7 | 7895 | 8821 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2743_17 | HRGMv2_2743_17_8 | 8818 | 9867 | + | Ldh_2 |
| CAZyme | HRGMv2_2743_17 | HRGMv2_2743_17_9 | 9901 | 12384 | + | GT4 |
Gene ID: HRGMv2_2743_17_5
Type: TC
Location: 3924 - 5756 (+)
Type: TC
Location: 3924 - 5756 (+)
Gene ID: HRGMv2_2743_17_6
Type: TC
Location: 5743 - 7614 (+)
Type: TC
Location: 5743 - 7614 (+)
Gene ID: HRGMv2_2743_17_7
Type:
Location: 7895 - 8821 (+)
Type:
Location: 7895 - 8821 (+)
Gene ID: HRGMv2_2743_17_8
Type: pfam
Location: 8818 - 9867 (+)
Type: pfam
Location: 8818 - 9867 (+)
Gene ID: HRGMv2_2743_17_9
Type: CAZyme
Location: 9901 - 12384 (+)
Type: CAZyme
Location: 9901 - 12384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UBA738
Species
UBA738 sp003522945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2743_17_8 | vegetarian > vegan | 1.07833 | 0.00360 |