Cluster: HRGMv2_2743_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2743
- CGC Family ID: CGCFAM_01699
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2743_26 | HRGMv2_2743_26_18 | 13765 | 16176 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_2743_26 | HRGMv2_2743_26_19 | 16366 | 16647 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2743_26 | HRGMv2_2743_26_20 | 16744 | 17034 | + | DUF1292 |
| TC | HRGMv2_2743_26 | HRGMv2_2743_26_21 | 17611 | 18300 | + | 2.A.78.1.1 |
| TC | HRGMv2_2743_26 | HRGMv2_2743_26_22 | 18297 | 18623 | + | 2.A.78.1.1 |
Gene ID: HRGMv2_2743_26_18
Type: CAZyme
Location: 13765 - 16176 (-)
Type: CAZyme
Location: 13765 - 16176 (-)
Gene ID: HRGMv2_2743_26_19
Type:
Location: 16366 - 16647 (+)
Type:
Location: 16366 - 16647 (+)
Gene ID: HRGMv2_2743_26_20
Type: pfam
Location: 16744 - 17034 (+)
Type: pfam
Location: 16744 - 17034 (+)
Gene ID: HRGMv2_2743_26_21
Type: TC
Location: 17611 - 18300 (+)
Type: TC
Location: 17611 - 18300 (+)
Gene ID: HRGMv2_2743_26_22
Type: TC
Location: 18297 - 18623 (+)
Type: TC
Location: 18297 - 18623 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UBA738
Species
UBA738 sp003522945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2743_26_18 | vegetarian > omnivore | 1.26214 | 0.00565 |
| HRGMv2_2743_26_20 | vegetarian > vegan | 1.02483 | 0.00360 |