dbCAN HGM

Cluster: HRGMv2_2743_CGC21

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2743_48	HRGMv2_2743_48_7	7646	8557	+	3.A.1.1.28
TC	HRGMv2_2743_48	HRGMv2_2743_48_8	8571	9440	+	3.A.1.1.34
pfam	HRGMv2_2743_48	HRGMv2_2743_48_9	9504	10478	+	Acetyltransf_1 \| Acetyltransf_7
CAZyme	HRGMv2_2743_48	HRGMv2_2743_48_10	10475	11173	+	CE14
STP	HRGMv2_2743_48	HRGMv2_2743_48_11	11174	12070	+	SIS
CAZyme	HRGMv2_2743_48	HRGMv2_2743_48_12	12073	12810	+	CE1

Gene ID: HRGMv2_2743_48_7
Type: TC
Location: 7646 - 8557 (+)

Gene ID: HRGMv2_2743_48_8
Type: TC
Location: 8571 - 9440 (+)

Gene ID: HRGMv2_2743_48_9
Type: pfam
Location: 9504 - 10478 (+)

Gene ID: HRGMv2_2743_48_10
Type: CAZyme
Location: 10475 - 11173 (+)

Gene ID: HRGMv2_2743_48_11
Type: STP
Location: 11174 - 12070 (+)

Gene ID: HRGMv2_2743_48_12
Type: CAZyme
Location: 12073 - 12810 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2743_48_7	vegetarian > omnivore	1.27752	0.00565
HRGMv2_2743_48_7	vegetarian > vegan	1.10174	0.00360
HRGMv2_2743_48_8	vegetarian > omnivore	1.65244	0.00565
HRGMv2_2743_48_8	vegetarian > vegan	1.69401	0.00360
HRGMv2_2743_48_9	vegetarian > vegan	1.20179	0.00360
HRGMv2_2743_48_10	vegetarian > vegan	1.17004	0.00360
HRGMv2_2743_48_11	vegetarian > vegan	1.01254	0.00360