Cluster: HRGMv2_2743_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2743
- CGC Family ID: CGCFAM_04070
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2743_17 | HRGMv2_2743_17_29 | 32462 | 33877 | - | 2.A.1.2.88 |
| pfam | HRGMv2_2743_17 | HRGMv2_2743_17_30 | 34004 | 34834 | + | GDPD |
| CAZyme | HRGMv2_2743_17 | HRGMv2_2743_17_31 | 34831 | 35973 | + | CE1 |
Gene ID: HRGMv2_2743_17_29
Type: TC
Location: 32462 - 33877 (-)
Type: TC
Location: 32462 - 33877 (-)
Gene ID: HRGMv2_2743_17_30
Type: pfam
Location: 34004 - 34834 (+)
Type: pfam
Location: 34004 - 34834 (+)
Gene ID: HRGMv2_2743_17_31
Type: CAZyme
Location: 34831 - 35973 (+)
Type: CAZyme
Location: 34831 - 35973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UBA738
Species
UBA738 sp003522945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2743_17_29 | vegetarian > omnivore | 1.12066 | 0.00565 |
| HRGMv2_2743_17_29 | vegetarian > vegan | 1.57750 | 0.00360 |
| HRGMv2_2743_17_30 | vegetarian > vegan | 1.16142 | 0.00360 |