Cluster: HRGMv2_2743_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2743
- CGC Family ID: CGCFAM_04443
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2743_43 | HRGMv2_2743_43_2 | 1093 | 2169 | - | 3.A.1.20.2 |
| TC | HRGMv2_2743_43 | HRGMv2_2743_43_3 | 2173 | 3885 | - | 3.A.1.20.2 |
| STP | HRGMv2_2743_43 | HRGMv2_2743_43_4 | 4046 | 5224 | - | SBP_bac_1 |
| pfam | HRGMv2_2743_43 | HRGMv2_2743_43_5 | 5506 | 8154 | + | GTP_EFTU | EFG_C | EFG_IV | NYN_YacP | EFG_III | EF-G_D2 |
| CAZyme | HRGMv2_2743_43 | HRGMv2_2743_43_6 | 8165 | 9232 | + | CE4 |
| TC | HRGMv2_2743_43 | HRGMv2_2743_43_7 | 9246 | 9866 | + | 1.A.62.2.1 |
Gene ID: HRGMv2_2743_43_2
Type: TC
Location: 1093 - 2169 (-)
Type: TC
Location: 1093 - 2169 (-)
Gene ID: HRGMv2_2743_43_3
Type: TC
Location: 2173 - 3885 (-)
Type: TC
Location: 2173 - 3885 (-)
Gene ID: HRGMv2_2743_43_4
Type: STP
Location: 4046 - 5224 (-)
Type: STP
Location: 4046 - 5224 (-)
Gene ID: HRGMv2_2743_43_5
Type: pfam
Location: 5506 - 8154 (+)
Type: pfam
Location: 5506 - 8154 (+)
Gene ID: HRGMv2_2743_43_6
Type: CAZyme
Location: 8165 - 9232 (+)
Type: CAZyme
Location: 8165 - 9232 (+)
Gene ID: HRGMv2_2743_43_7
Type: TC
Location: 9246 - 9866 (+)
Type: TC
Location: 9246 - 9866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UBA738
Species
UBA738 sp003522945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2743_43_6 | vegetarian > vegan | 1.12684 | 0.00360 |