dbCAN HGM

Cluster: HRGMv2_2743_CGC15

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2743_20	HRGMv2_2743_20_7	11403	12362	-	GT2
NULL(UNKNOWN)	HRGMv2_2743_20	HRGMv2_2743_20_8	12355	14610	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_2743_20	HRGMv2_2743_20_9	14638	17463	-	GT2 \| GT32 \| GT4
CAZyme	HRGMv2_2743_20	HRGMv2_2743_20_10	17478	19715	-	GT4 \| GT4
TC	HRGMv2_2743_20	HRGMv2_2743_20_11	19712	20440	-	3.A.1.103.1
TC	HRGMv2_2743_20	HRGMv2_2743_20_12	20454	21251	-	3.A.1.103.6
CAZyme	HRGMv2_2743_20	HRGMv2_2743_20_13	21265	22095	-	GT2

Gene ID: HRGMv2_2743_20_7
Type: CAZyme
Location: 11403 - 12362 (-)

Gene ID: HRGMv2_2743_20_8
Type:
Location: 12355 - 14610 (-)

Gene ID: HRGMv2_2743_20_9
Type: CAZyme
Location: 14638 - 17463 (-)

Gene ID: HRGMv2_2743_20_10
Type: CAZyme
Location: 17478 - 19715 (-)

Gene ID: HRGMv2_2743_20_11
Type: TC
Location: 19712 - 20440 (-)

Gene ID: HRGMv2_2743_20_12
Type: TC
Location: 20454 - 21251 (-)

Gene ID: HRGMv2_2743_20_13
Type: CAZyme
Location: 21265 - 22095 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2743_20_8	vegetarian > vegan	1.21740	0.00360
HRGMv2_2743_20_9	vegetarian > omnivore	1.80573	0.01851
HRGMv2_2743_20_9	vegetarian > vegan	1.75337	0.00360
HRGMv2_2743_20_13	vegetarian > vegan	1.05871	0.00360