Genome Details
Selected Rep_genome_ID: HRGMv2_2683
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH154_maxbin.010_sub | 2,335,786 | 97.96% | 1.21% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2683 | 2,234,664 | 96.84% | 0% | Ghana | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_D_9_CHE0010BZ.91 | 2,376,108 | 96% | 0.68% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2683_CGC1 | CGCFAM_00040 | Yes | 7 | 4 | |
| HRGMv2_2683_CGC10 | CGCFAM_00157 | Yes | 6 | 3 | |
| HRGMv2_2683_CGC11 | CGCFAM_00252 | Yes | 4 | 1 | |
| HRGMv2_2683_CGC21 | CGCFAM_00342 | Yes | 4 | 1 | |
| HRGMv2_2683_CGC18 | CGCFAM_00688 | Yes | 7 | 1 | |
| HRGMv2_2683_CGC6 | CGCFAM_01009 | Yes | 11 | 1 | |
| HRGMv2_2683_CGC19 | CGCFAM_02493 | Yes | 5 | 2 | |
| HRGMv2_2683_CGC12 | CGCFAM_02683 | Yes | 7 | 2 | |
| HRGMv2_2683_CGC7 | CGCFAM_05126 | Yes | 10 | 2 |
Top CAZyme Families