Cluster: HRGMv2_2683_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2683
- CGC Family ID: CGCFAM_00157
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2683_27 | HRGMv2_2683_27_4 | 2810 | 3610 | + | CE1 |
| TC | HRGMv2_2683_27 | HRGMv2_2683_27_5 | 3699 | 4748 | + | 2.A.56.1.5 |
| TC | HRGMv2_2683_27 | HRGMv2_2683_27_6 | 4868 | 5362 | + | 2.A.56.1.5 |
| TC | HRGMv2_2683_27 | HRGMv2_2683_27_7 | 5366 | 6667 | + | 2.A.56.1.5 |
| CAZyme | HRGMv2_2683_27 | HRGMv2_2683_27_8 | 6787 | 9282 | + | GH31_2 |
| CAZyme | HRGMv2_2683_27 | HRGMv2_2683_27_9 | 9304 | 11820 | + | GH31_2 |
Gene ID: HRGMv2_2683_27_4
Type: CAZyme
Location: 2810 - 3610 (+)
Type: CAZyme
Location: 2810 - 3610 (+)
Gene ID: HRGMv2_2683_27_5
Type: TC
Location: 3699 - 4748 (+)
Type: TC
Location: 3699 - 4748 (+)
Gene ID: HRGMv2_2683_27_6
Type: TC
Location: 4868 - 5362 (+)
Type: TC
Location: 4868 - 5362 (+)
Gene ID: HRGMv2_2683_27_7
Type: TC
Location: 5366 - 6667 (+)
Type: TC
Location: 5366 - 6667 (+)
Gene ID: HRGMv2_2683_27_8
Type: CAZyme
Location: 6787 - 9282 (+)
Type: CAZyme
Location: 6787 - 9282 (+)
Gene ID: HRGMv2_2683_27_9
Type: CAZyme
Location: 9304 - 11820 (+)
Type: CAZyme
Location: 9304 - 11820 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.