Cluster: HRGMv2_2683_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2683
- CGC Family ID: CGCFAM_00252
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2683_28 | HRGMv2_2683_28_4 | 3826 | 5430 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2683_28 | HRGMv2_2683_28_5 | 5464 | 6258 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2683_28 | HRGMv2_2683_28_6 | 6329 | 7444 | - | Acyl_transf_3 |
| TC | HRGMv2_2683_28 | HRGMv2_2683_28_7 | 7936 | 9402 | + | 4.C.1.1.4 |
Gene ID: HRGMv2_2683_28_4
Type: CAZyme
Location: 3826 - 5430 (-)
Type: CAZyme
Location: 3826 - 5430 (-)
Gene ID: HRGMv2_2683_28_5
Type:
Location: 5464 - 6258 (-)
Type:
Location: 5464 - 6258 (-)
Gene ID: HRGMv2_2683_28_6
Type: pfam
Location: 6329 - 7444 (-)
Type: pfam
Location: 6329 - 7444 (-)
Gene ID: HRGMv2_2683_28_7
Type: TC
Location: 7936 - 9402 (+)
Type: TC
Location: 7936 - 9402 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.