PROTEIN: HRGMv2_2683_28_5
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Protein File & Metadata
Source:
HRGMv2_2683_28_5.pdb
Genome ID:
Protein ID:
HRGMv2_2683_28_5
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Protein Sequence
MNHETPVTPA ALQAHIAELE QQLKLSDEGV SRLAQRCLEL EQQLLVCQTE LAKHSTETDN 60 IALTLPQLFY DTGNGFSPRE CLIATEDAYN ELTHEVSVTF ILPEDARAIR LDPGELACCI 120 TDLAISDERI SFQSINGLML QEDCLLFLDV DPNLSLHCTS GFGAGMKFAV NYRYYPLGRF 180 LHEQPGKSLL RALNDLKLKN DAAAQEADEA LQTSRAECMR LNQQLLTLQG IQHEYQVSLE 240 TMRASSSWRL TAPLRRLLNL VRGH 264
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A135YZW4 | GT2 | 24 | 254 | 30 | 440 | 0.4385 |
0.6277 |
| G5KHB8 | GT2 | 19 | 249 | 52 | 435 | 0.4193 |
0.5951 |
| AF-A0A3S4IR35-F1-model_v4 | GT2 | 54 | 256 | 243 | 438 | 0.3988 |
0.6448 |
| AF-A0A6G8HXJ4-F1-model_v4 | GT2 | 53 | 256 | 242 | 438 | 0.3925 |
0.6321 |
| AF-A0A2Z4PLP0-F1-model_v4 | GT4 | 55 | 232 | 390 | 566 | 0.377 |
0.7393 |
| AF-A0A7L8W6I6-F1-model_v4 | GT4 | 47 | 240 | 78 | 576 | 0.3753 |
0.6769 |
| AF-A0A8B4IS17-F1-model_v4 | GT4 | 57 | 254 | 399 | 582 | 0.3733 |
0.7047 |
| AF-U5PC29-F1-model_v4 | GT2 | 45 | 234 | 264 | 445 | 0.3722 |
0.6483 |
| A0A7G8TFN0 | GT2 , GT4 | 45 | 249 | 161 | 425 | 0.3459 |
0.7297 |
| A0A2U1CC34 | GT4 | 51 | 242 | 209 | 385 | 0.3401 |
0.7524 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A135YZW4 | GT2 | 24 | 254 | 30 | 440 | 0.4385 |
0.6277 |
| G5KHB8 | GT2 | 19 | 249 | 52 | 435 | 0.4193 |
0.5951 |
| A0A6G8HXJ4 | GT2 | 53 | 256 | 242 | 438 | 0.3925 |
0.6321 |
| A0A2Z4PLP0 | GT4 | 55 | 232 | 390 | 566 | 0.377 |
0.7393 |
| A0A7G8TFN0 | GT2 , GT4 | 45 | 249 | 161 | 425 | 0.3459 |
0.7297 |
| A0A2U1CC34 | GT4 | 51 | 242 | 209 | 385 | 0.3401 |
0.7524 |
| A0A4P9E9V2 | GT2 , GT4 | 52 | 209 | 543 | 1329 | 0.2667 |
0.7499 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.