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Cluster: HRGMv2_2683_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2683_14 HRGMv2_2683_14_5 3230 4831 - GH36
TC HRGMv2_2683_14 HRGMv2_2683_14_6 4824 6209 - 2.A.2.1.1
CAZyme HRGMv2_2683_14 HRGMv2_2683_14_7 6200 8581 - GH2
STP HRGMv2_2683_14 HRGMv2_2683_14_8 8578 9141 - TetR_N
TC HRGMv2_2683_14 HRGMv2_2683_14_9 9383 10369 - 2.A.56.1.5
TC HRGMv2_2683_14 HRGMv2_2683_14_10 10493 11794 - 2.A.56.1.5
pfam HRGMv2_2683_14 HRGMv2_2683_14_11 11798 12352 - DctQ
TC HRGMv2_2683_14 HRGMv2_2683_14_12 12364 13389 - 2.A.56.1.5
TF HRGMv2_2683_14 HRGMv2_2683_14_13 13614 14405 - HTH_AraC | HTH_AraC
TC HRGMv2_2683_14 HRGMv2_2683_14_14 14402 15889 - 8.A.59.2.1
Gene ID: HRGMv2_2683_14_5
Type: CAZyme
Location: 3230 - 4831 (-)
Gene ID: HRGMv2_2683_14_6
Type: TC
Location: 4824 - 6209 (-)
Gene ID: HRGMv2_2683_14_7
Type: CAZyme
Location: 6200 - 8581 (-)
Gene ID: HRGMv2_2683_14_8
Type: STP
Location: 8578 - 9141 (-)
Gene ID: HRGMv2_2683_14_9
Type: TC
Location: 9383 - 10369 (-)
Gene ID: HRGMv2_2683_14_10
Type: TC
Location: 10493 - 11794 (-)
Gene ID: HRGMv2_2683_14_11
Type: pfam
Location: 11798 - 12352 (-)
Gene ID: HRGMv2_2683_14_12
Type: TC
Location: 12364 - 13389 (-)
Gene ID: HRGMv2_2683_14_13
Type: TF
Location: 13614 - 14405 (-)
Gene ID: HRGMv2_2683_14_14
Type: TC
Location: 14402 - 15889 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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