Cluster: HRGMv2_2683_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2683
- CGC Family ID: CGCFAM_00040
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2683_1 | HRGMv2_2683_1_52 | 50750 | 51496 | + | GT26 |
| CAZyme | HRGMv2_2683_1 | HRGMv2_2683_1_53 | 51496 | 52608 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2683_1 | HRGMv2_2683_1_54 | 52734 | 52913 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2683_1 | HRGMv2_2683_1_55 | 52910 | 54169 | + | Wzy_C |
| CAZyme | HRGMv2_2683_1 | HRGMv2_2683_1_56 | 54418 | 55470 | + | GT4 |
| CAZyme | HRGMv2_2683_1 | HRGMv2_2683_1_57 | 55582 | 56652 | + | GT4 |
| TC | HRGMv2_2683_1 | HRGMv2_2683_1_58 | 56655 | 58109 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_2683_1_52
Type: CAZyme
Location: 50750 - 51496 (+)
Type: CAZyme
Location: 50750 - 51496 (+)
Gene ID: HRGMv2_2683_1_53
Type: CAZyme
Location: 51496 - 52608 (+)
Type: CAZyme
Location: 51496 - 52608 (+)
Gene ID: HRGMv2_2683_1_54
Type:
Location: 52734 - 52913 (+)
Type:
Location: 52734 - 52913 (+)
Gene ID: HRGMv2_2683_1_55
Type: pfam
Location: 52910 - 54169 (+)
Type: pfam
Location: 52910 - 54169 (+)
Gene ID: HRGMv2_2683_1_56
Type: CAZyme
Location: 54418 - 55470 (+)
Type: CAZyme
Location: 54418 - 55470 (+)
Gene ID: HRGMv2_2683_1_57
Type: CAZyme
Location: 55582 - 56652 (+)
Type: CAZyme
Location: 55582 - 56652 (+)
Gene ID: HRGMv2_2683_1_58
Type: TC
Location: 56655 - 58109 (+)
Type: TC
Location: 56655 - 58109 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.