Cluster: HRGMv2_2683_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2683
- CGC Family ID: CGCFAM_02493
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2683_56 | HRGMv2_2683_56_3 | 1987 | 2499 | + | 4.A.1.1.13 |
| CAZyme | HRGMv2_2683_56 | HRGMv2_2683_56_4 | 2578 | 3705 | - | CE9 |
| TC | HRGMv2_2683_56 | HRGMv2_2683_56_5 | 3910 | 5373 | - | 4.A.1.1.7 |
| STP | HRGMv2_2683_56 | HRGMv2_2683_56_6 | 5659 | 6168 | - | NUDIX |
| CAZyme | HRGMv2_2683_56 | HRGMv2_2683_56_7 | 6399 | 6989 | - | CBM13 |
Gene ID: HRGMv2_2683_56_3
Type: TC
Location: 1987 - 2499 (+)
Type: TC
Location: 1987 - 2499 (+)
Gene ID: HRGMv2_2683_56_4
Type: CAZyme
Location: 2578 - 3705 (-)
Type: CAZyme
Location: 2578 - 3705 (-)
Gene ID: HRGMv2_2683_56_5
Type: TC
Location: 3910 - 5373 (-)
Type: TC
Location: 3910 - 5373 (-)
Gene ID: HRGMv2_2683_56_6
Type: STP
Location: 5659 - 6168 (-)
Type: STP
Location: 5659 - 6168 (-)
Gene ID: HRGMv2_2683_56_7
Type: CAZyme
Location: 6399 - 6989 (-)
Type: CAZyme
Location: 6399 - 6989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.