Cluster: HRGMv2_2683_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2683
- CGC Family ID: CGCFAM_02683
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2683_30 | HRGMv2_2683_30_2 | 1610 | 3508 | + | 9.B.18.2.1 |
| pfam | HRGMv2_2683_30 | HRGMv2_2683_30_3 | 3593 | 4879 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| NULL(UNKNOWN) | HRGMv2_2683_30 | HRGMv2_2683_30_4 | 5081 | 5479 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2683_30 | HRGMv2_2683_30_5 | 5586 | 6491 | - | 8.A.21.2.2 |
| pfam | HRGMv2_2683_30 | HRGMv2_2683_30_6 | 6507 | 6968 | - | NfeD |
| CAZyme | HRGMv2_2683_30 | HRGMv2_2683_30_7 | 7140 | 8996 | - | GH13_39 |
| CAZyme | HRGMv2_2683_30 | HRGMv2_2683_30_8 | 9071 | 11476 | - | GT35 |
Gene ID: HRGMv2_2683_30_2
Type: TC
Location: 1610 - 3508 (+)
Type: TC
Location: 1610 - 3508 (+)
Gene ID: HRGMv2_2683_30_3
Type: pfam
Location: 3593 - 4879 (+)
Type: pfam
Location: 3593 - 4879 (+)
Gene ID: HRGMv2_2683_30_4
Type:
Location: 5081 - 5479 (+)
Type:
Location: 5081 - 5479 (+)
Gene ID: HRGMv2_2683_30_5
Type: TC
Location: 5586 - 6491 (-)
Type: TC
Location: 5586 - 6491 (-)
Gene ID: HRGMv2_2683_30_6
Type: pfam
Location: 6507 - 6968 (-)
Type: pfam
Location: 6507 - 6968 (-)
Gene ID: HRGMv2_2683_30_7
Type: CAZyme
Location: 7140 - 8996 (-)
Type: CAZyme
Location: 7140 - 8996 (-)
Gene ID: HRGMv2_2683_30_8
Type: CAZyme
Location: 9071 - 11476 (-)
Type: CAZyme
Location: 9071 - 11476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.