Genome Details
Selected Rep_genome_ID: HRGMv2_2532
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2532 | 1,859,885 | 99.41% | 0.796% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2532_CGC7 | CGCFAM_00311 | Yes | 15 | 7 | host glycan |
| HRGMv2_2532_CGC19 | CGCFAM_01081 | Yes | 11 | 2 | |
| HRGMv2_2532_CGC4 | CGCFAM_01738 | Yes | 7 | 1 | |
| HRGMv2_2532_CGC13 | CGCFAM_02151 | Yes | 5 | 1 | |
| HRGMv2_2532_CGC15 | CGCFAM_02736 | Yes | 6 | 1 | |
| HRGMv2_2532_CGC9 | CGCFAM_02831 | Yes | 5 | 1 | |
| HRGMv2_2532_CGC11 | CGCFAM_03092 | Yes | 6 | 1 | |
| HRGMv2_2532_CGC17 | CGCFAM_03873 | Yes | 9 | 1 |
Top CAZyme Families