Cluster: HRGMv2_2532_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2532
- CGC Family ID: CGCFAM_02831
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2532_7 | HRGMv2_2532_7_12 | 8137 | 13284 | + | GH95 |
| TC | HRGMv2_2532_7 | HRGMv2_2532_7_13 | 13698 | 14501 | - | 3.A.1.34.1 |
| TC | HRGMv2_2532_7 | HRGMv2_2532_7_14 | 14514 | 15407 | - | 3.A.1.34.1 |
| TC | HRGMv2_2532_7 | HRGMv2_2532_7_15 | 15419 | 16396 | - | 3.A.1.34.1 |
| TC | HRGMv2_2532_7 | HRGMv2_2532_7_16 | 17028 | 17975 | - | 2.A.69.4.5 |
Gene ID: HRGMv2_2532_7_12
Type: CAZyme
Location: 8137 - 13284 (+)
Type: CAZyme
Location: 8137 - 13284 (+)
Gene ID: HRGMv2_2532_7_13
Type: TC
Location: 13698 - 14501 (-)
Type: TC
Location: 13698 - 14501 (-)
Gene ID: HRGMv2_2532_7_14
Type: TC
Location: 14514 - 15407 (-)
Type: TC
Location: 14514 - 15407 (-)
Gene ID: HRGMv2_2532_7_15
Type: TC
Location: 15419 - 16396 (-)
Type: TC
Location: 15419 - 16396 (-)
Gene ID: HRGMv2_2532_7_16
Type: TC
Location: 17028 - 17975 (-)
Type: TC
Location: 17028 - 17975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.