Cluster: HRGMv2_2532_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2532
- CGC Family ID: CGCFAM_02736
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2532_21 | HRGMv2_2532_21_28 | 24451 | 24774 | - | 3.A.14.1.2 |
| TC | HRGMv2_2532_21 | HRGMv2_2532_21_29 | 24776 | 25792 | - | 3.A.14.1.1 |
| TC | HRGMv2_2532_21 | HRGMv2_2532_21_30 | 25740 | 26681 | - | 3.A.14.1.2 |
| pfam | HRGMv2_2532_21 | HRGMv2_2532_21_31 | 26758 | 27129 | - | DUF1033 |
| pfam | HRGMv2_2532_21 | HRGMv2_2532_21_32 | 27275 | 28333 | - | ADH_zinc_N | ADH_N |
| CAZyme | HRGMv2_2532_21 | HRGMv2_2532_21_33 | 28496 | 29647 | - | CE9 |
Gene ID: HRGMv2_2532_21_28
Type: TC
Location: 24451 - 24774 (-)
Type: TC
Location: 24451 - 24774 (-)
Gene ID: HRGMv2_2532_21_29
Type: TC
Location: 24776 - 25792 (-)
Type: TC
Location: 24776 - 25792 (-)
Gene ID: HRGMv2_2532_21_30
Type: TC
Location: 25740 - 26681 (-)
Type: TC
Location: 25740 - 26681 (-)
Gene ID: HRGMv2_2532_21_31
Type: pfam
Location: 26758 - 27129 (-)
Type: pfam
Location: 26758 - 27129 (-)
Gene ID: HRGMv2_2532_21_32
Type: pfam
Location: 27275 - 28333 (-)
Type: pfam
Location: 27275 - 28333 (-)
Gene ID: HRGMv2_2532_21_33
Type: CAZyme
Location: 28496 - 29647 (-)
Type: CAZyme
Location: 28496 - 29647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.