dbCAN Logo

Cluster: HRGMv2_2532_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2532_33 HRGMv2_2532_33_3 2150 4312 + GH36
TC HRGMv2_2532_33 HRGMv2_2532_33_4 4347 5606 + 3.A.1.1.28
TC HRGMv2_2532_33 HRGMv2_2532_33_5 5620 6486 + 3.A.1.1.28
TC HRGMv2_2532_33 HRGMv2_2532_33_6 6500 7333 + 3.A.1.1.28
CAZyme HRGMv2_2532_33 HRGMv2_2532_33_7 7574 9016 + GH13_18
TC HRGMv2_2532_33 HRGMv2_2532_33_8 9154 10347 + 9.B.67.1.2
TF HRGMv2_2532_33 HRGMv2_2532_33_9 10493 10936 + MarR
TC HRGMv2_2532_33 HRGMv2_2532_33_10 11177 11905 + 3.A.1.12.8
TC HRGMv2_2532_33 HRGMv2_2532_33_11 11898 13418 + 3.A.1.12.8
STP HRGMv2_2532_33 HRGMv2_2532_33_12 13556 14092 - TetR_N
TC HRGMv2_2532_33 HRGMv2_2532_33_13 14225 15115 + 2.A.4.1.7
Gene ID: HRGMv2_2532_33_3
Type: CAZyme
Location: 2150 - 4312 (+)
Gene ID: HRGMv2_2532_33_4
Type: TC
Location: 4347 - 5606 (+)
Gene ID: HRGMv2_2532_33_5
Type: TC
Location: 5620 - 6486 (+)
Gene ID: HRGMv2_2532_33_6
Type: TC
Location: 6500 - 7333 (+)
Gene ID: HRGMv2_2532_33_7
Type: CAZyme
Location: 7574 - 9016 (+)
Gene ID: HRGMv2_2532_33_8
Type: TC
Location: 9154 - 10347 (+)
Gene ID: HRGMv2_2532_33_9
Type: TF
Location: 10493 - 10936 (+)
Gene ID: HRGMv2_2532_33_10
Type: TC
Location: 11177 - 11905 (+)
Gene ID: HRGMv2_2532_33_11
Type: TC
Location: 11898 - 13418 (+)
Gene ID: HRGMv2_2532_33_12
Type: STP
Location: 13556 - 14092 (-)
Gene ID: HRGMv2_2532_33_13
Type: TC
Location: 14225 - 15115 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List