Genome Details
Selected Rep_genome_ID: HRGMv2_2504
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2504 | 1,791,885 | 99.2% | 0.641% | South Korea | Asia | HRGM |
| Rep_1150 | 1,855,725 | 98.3842% | 1.72643% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2504_CGC10 | CGCFAM_00160 | Yes | 6 | 3 | alpha-glucan |
| HRGMv2_2504_CGC17 | CGCFAM_00401 | Yes | 9 | 3 | |
| HRGMv2_2504_CGC23 | CGCFAM_00486 | Yes | 7 | 2 | |
| HRGMv2_2504_CGC3 | CGCFAM_00598 | Yes | 13 | 5 | |
| HRGMv2_2504_CGC18 | CGCFAM_01064 | Yes | 14 | 3 | |
| HRGMv2_2504_CGC22 | CGCFAM_01081 | Yes | 14 | 2 | |
| HRGMv2_2504_CGC25 | CGCFAM_01421 | Yes | 9 | 1 | |
| HRGMv2_2504_CGC14 | CGCFAM_01737 | Yes | 7 | 1 | |
| HRGMv2_2504_CGC11 | CGCFAM_04057 | Yes | 9 | 2 |
Top CAZyme Families