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Cluster: HRGMv2_2504_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2504_7 HRGMv2_2504_7_68 68021 68665 - 9.B.28.1.4
pfam HRGMv2_2504_7 HRGMv2_2504_7_69 68686 69138 - DUF386
TC HRGMv2_2504_7 HRGMv2_2504_7_70 69629 70468 - 3.A.1.1.34
TC HRGMv2_2504_7 HRGMv2_2504_7_71 70484 71371 - 3.A.1.1.20
STP HRGMv2_2504_7 HRGMv2_2504_7_72 71570 72898 - SBP_bac_1
pfam HRGMv2_2504_7 HRGMv2_2504_7_73 73013 73711 - NanE
CAZyme HRGMv2_2504_7 HRGMv2_2504_7_74 73945 74991 - GH33
CAZyme HRGMv2_2504_7 HRGMv2_2504_7_75 75002 76756 - CBM40 | GH33
CAZyme HRGMv2_2504_7 HRGMv2_2504_7_76 77092 78072 - CE7
Gene ID: HRGMv2_2504_7_68
Type: TC
Location: 68021 - 68665 (-)
Gene ID: HRGMv2_2504_7_69
Type: pfam
Location: 68686 - 69138 (-)
Gene ID: HRGMv2_2504_7_70
Type: TC
Location: 69629 - 70468 (-)
Gene ID: HRGMv2_2504_7_71
Type: TC
Location: 70484 - 71371 (-)
Gene ID: HRGMv2_2504_7_72
Type: STP
Location: 71570 - 72898 (-)
Gene ID: HRGMv2_2504_7_73
Type: pfam
Location: 73013 - 73711 (-)
Gene ID: HRGMv2_2504_7_74
Type: CAZyme
Location: 73945 - 74991 (-)
Gene ID: HRGMv2_2504_7_75
Type: CAZyme
Location: 75002 - 76756 (-)
Gene ID: HRGMv2_2504_7_76
Type: CAZyme
Location: 77092 - 78072 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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