Cluster: HRGMv2_2504_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2504
- CGC Family ID: CGCFAM_00486
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2504_15 | HRGMv2_2504_15_33 | 35743 | 37605 | - | GH20 |
| TF | HRGMv2_2504_15 | HRGMv2_2504_15_34 | 37900 | 38616 | - | GntR |
| CAZyme | HRGMv2_2504_15 | HRGMv2_2504_15_35 | 38939 | 40726 | + | GH35 |
| TC | HRGMv2_2504_15 | HRGMv2_2504_15_36 | 40723 | 41199 | + | 4.A.6.1.18 |
| TC | HRGMv2_2504_15 | HRGMv2_2504_15_37 | 41226 | 42131 | + | 4.A.6.1.18 |
| TC | HRGMv2_2504_15 | HRGMv2_2504_15_38 | 42118 | 42939 | + | 4.A.6.1.18 |
| TC | HRGMv2_2504_15 | HRGMv2_2504_15_39 | 42943 | 43347 | + | 4.A.6.1.18 |
Gene ID: HRGMv2_2504_15_33
Type: CAZyme
Location: 35743 - 37605 (-)
Type: CAZyme
Location: 35743 - 37605 (-)
Gene ID: HRGMv2_2504_15_34
Type: TF
Location: 37900 - 38616 (-)
Type: TF
Location: 37900 - 38616 (-)
Gene ID: HRGMv2_2504_15_35
Type: CAZyme
Location: 38939 - 40726 (+)
Type: CAZyme
Location: 38939 - 40726 (+)
Gene ID: HRGMv2_2504_15_36
Type: TC
Location: 40723 - 41199 (+)
Type: TC
Location: 40723 - 41199 (+)
Gene ID: HRGMv2_2504_15_37
Type: TC
Location: 41226 - 42131 (+)
Type: TC
Location: 41226 - 42131 (+)
Gene ID: HRGMv2_2504_15_38
Type: TC
Location: 42118 - 42939 (+)
Type: TC
Location: 42118 - 42939 (+)
Gene ID: HRGMv2_2504_15_39
Type: TC
Location: 42943 - 43347 (+)
Type: TC
Location: 42943 - 43347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.