Cluster: HRGMv2_2504_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2504
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_101 | 104560 | 105540 | + | 9.B.146.1.6 |
| CAZyme | HRGMv2_2504_3 | HRGMv2_2504_3_102 | 105610 | 108654 | - | GH95 |
| CAZyme | HRGMv2_2504_3 | HRGMv2_2504_3_103 | 108658 | 110493 | - | GH95 |
| TF | HRGMv2_2504_3 | HRGMv2_2504_3_104 | 110747 | 111460 | - | GntR |
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_105 | 111645 | 113612 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_2504_3 | HRGMv2_2504_3_106 | 113791 | 115416 | + | GH13_29 |
Gene ID: HRGMv2_2504_3_101
Type: TC
Location: 104560 - 105540 (+)
Type: TC
Location: 104560 - 105540 (+)
Gene ID: HRGMv2_2504_3_102
Type: CAZyme
Location: 105610 - 108654 (-)
Type: CAZyme
Location: 105610 - 108654 (-)
Gene ID: HRGMv2_2504_3_103
Type: CAZyme
Location: 108658 - 110493 (-)
Type: CAZyme
Location: 108658 - 110493 (-)
Gene ID: HRGMv2_2504_3_104
Type: TF
Location: 110747 - 111460 (-)
Type: TF
Location: 110747 - 111460 (-)
Gene ID: HRGMv2_2504_3_105
Type: TC
Location: 111645 - 113612 (+)
Type: TC
Location: 111645 - 113612 (+)
Gene ID: HRGMv2_2504_3_106
Type: CAZyme
Location: 113791 - 115416 (+)
Type: CAZyme
Location: 113791 - 115416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.