Cluster: HRGMv2_2504_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2504
- CGC Family ID: CGCFAM_00598
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2504_1 | HRGMv2_2504_1_106 | 118989 | 120041 | - | GT113 |
| STP | HRGMv2_2504_1 | HRGMv2_2504_1_107 | 120069 | 121172 | - | Pyr_redox |
| TC | HRGMv2_2504_1 | HRGMv2_2504_1_108 | 121174 | 122598 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | HRGMv2_2504_1 | HRGMv2_2504_1_109 | 122595 | 123746 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2504_1 | HRGMv2_2504_1_110 | 123748 | 124740 | - | GT2 |
| CAZyme | HRGMv2_2504_1 | HRGMv2_2504_1_111 | 124749 | 125741 | - | GT2 |
| pfam | HRGMv2_2504_1 | HRGMv2_2504_1_112 | 125738 | 126703 | - | DUF6625 |
| pfam | HRGMv2_2504_1 | HRGMv2_2504_1_113 | 126700 | 127341 | - | DUF1919 |
| CAZyme | HRGMv2_2504_1 | HRGMv2_2504_1_114 | 127334 | 128491 | - | GT4 |
| CAZyme | HRGMv2_2504_1 | HRGMv2_2504_1_115 | 128495 | 129667 | - | GT4 |
| TC | HRGMv2_2504_1 | HRGMv2_2504_1_116 | 129696 | 131063 | - | 9.B.18.1.2 |
| TC | HRGMv2_2504_1 | HRGMv2_2504_1_117 | 131085 | 131768 | - | 8.A.3.2.2 |
| TC | HRGMv2_2504_1 | HRGMv2_2504_1_118 | 131778 | 132470 | - | 8.A.3.2.3 |
Gene ID: HRGMv2_2504_1_106
Type: CAZyme
Location: 118989 - 120041 (-)
Type: CAZyme
Location: 118989 - 120041 (-)
Gene ID: HRGMv2_2504_1_107
Type: STP
Location: 120069 - 121172 (-)
Type: STP
Location: 120069 - 121172 (-)
Gene ID: HRGMv2_2504_1_108
Type: TC
Location: 121174 - 122598 (-)
Type: TC
Location: 121174 - 122598 (-)
Gene ID: HRGMv2_2504_1_109
Type:
Location: 122595 - 123746 (-)
Type:
Location: 122595 - 123746 (-)
Gene ID: HRGMv2_2504_1_110
Type: CAZyme
Location: 123748 - 124740 (-)
Type: CAZyme
Location: 123748 - 124740 (-)
Gene ID: HRGMv2_2504_1_111
Type: CAZyme
Location: 124749 - 125741 (-)
Type: CAZyme
Location: 124749 - 125741 (-)
Gene ID: HRGMv2_2504_1_112
Type: pfam
Location: 125738 - 126703 (-)
Type: pfam
Location: 125738 - 126703 (-)
Gene ID: HRGMv2_2504_1_113
Type: pfam
Location: 126700 - 127341 (-)
Type: pfam
Location: 126700 - 127341 (-)
Gene ID: HRGMv2_2504_1_114
Type: CAZyme
Location: 127334 - 128491 (-)
Type: CAZyme
Location: 127334 - 128491 (-)
Gene ID: HRGMv2_2504_1_115
Type: CAZyme
Location: 128495 - 129667 (-)
Type: CAZyme
Location: 128495 - 129667 (-)
Gene ID: HRGMv2_2504_1_116
Type: TC
Location: 129696 - 131063 (-)
Type: TC
Location: 129696 - 131063 (-)
Gene ID: HRGMv2_2504_1_117
Type: TC
Location: 131085 - 131768 (-)
Type: TC
Location: 131085 - 131768 (-)
Gene ID: HRGMv2_2504_1_118
Type: TC
Location: 131778 - 132470 (-)
Type: TC
Location: 131778 - 132470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.