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Cluster: HRGMv2_2504_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2504_3 HRGMv2_2504_3_117 121874 122845 - 3.A.1.14.15
TC HRGMv2_2504_3 HRGMv2_2504_3_118 122943 123695 - 3.A.1.14.3
pfam HRGMv2_2504_3 HRGMv2_2504_3_119 123692 124648 - FecCD
TC HRGMv2_2504_3 HRGMv2_2504_3_120 124638 125597 - 3.A.1.14.13
peptidase HRGMv2_2504_3 HRGMv2_2504_3_121 125834 126898 + M42.001
pfam HRGMv2_2504_3 HRGMv2_2504_3_122 126920 127216 + EntA_Immun
TC HRGMv2_2504_3 HRGMv2_2504_3_123 127313 128944 - 2.A.58.2.2
CAZyme HRGMv2_2504_3 HRGMv2_2504_3_124 129278 130924 + GH85
CAZyme HRGMv2_2504_3 HRGMv2_2504_3_125 131024 134002 + CBM32
Gene ID: HRGMv2_2504_3_117
Type: TC
Location: 121874 - 122845 (-)
Gene ID: HRGMv2_2504_3_118
Type: TC
Location: 122943 - 123695 (-)
Gene ID: HRGMv2_2504_3_119
Type: pfam
Location: 123692 - 124648 (-)
Gene ID: HRGMv2_2504_3_120
Type: TC
Location: 124638 - 125597 (-)
Gene ID: HRGMv2_2504_3_121
Type: peptidase
Location: 125834 - 126898 (+)
Gene ID: HRGMv2_2504_3_122
Type: pfam
Location: 126920 - 127216 (+)
Gene ID: HRGMv2_2504_3_123
Type: TC
Location: 127313 - 128944 (-)
Gene ID: HRGMv2_2504_3_124
Type: CAZyme
Location: 129278 - 130924 (+)
Gene ID: HRGMv2_2504_3_125
Type: CAZyme
Location: 131024 - 134002 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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