Genome Details
Selected Rep_genome_ID: HRGMv2_2451
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2451 | 3,277,916 | 94.03% | 1.449% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2451_CGC4 | CGCFAM_00003 | Yes | 9 | 3 | |
| HRGMv2_2451_CGC2 | CGCFAM_00009 | Yes | 16 | 7 | |
| HRGMv2_2451_CGC3 | CGCFAM_00047 | Yes | 7 | 2 | |
| HRGMv2_2451_CGC19 | CGCFAM_00193 | Yes | 6 | 3 | |
| HRGMv2_2451_CGC36 | CGCFAM_00204 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC17 | CGCFAM_00377 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC24 | CGCFAM_00387 | Yes | 4 | 1 | |
| HRGMv2_2451_CGC8 | CGCFAM_00411 | Yes | 7 | 1 | |
| HRGMv2_2451_CGC27 | CGCFAM_00500 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC32 | CGCFAM_00842 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC18 | CGCFAM_00945 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC10 | CGCFAM_01345 | Yes | 6 | 1 | |
| HRGMv2_2451_CGC1 | CGCFAM_01884 | Yes | 10 | 2 | |
| HRGMv2_2451_CGC33 | CGCFAM_03326 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC31 | CGCFAM_03833 | Yes | 3 | 1 | |
| HRGMv2_2451_CGC12 | CGCFAM_07461 | Yes | 4 | 1 | |
| HRGMv2_2451_CGC11 | CGCFAM_10088 | Yes | 3 | 1 |
Top CAZyme Families