Cluster: HRGMv2_2451_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- CGC Family ID: CGCFAM_00387
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_20 | HRGMv2_2451_20_40 | 45428 | 47179 | - | 3.A.1.21.1 |
| TC | HRGMv2_2451_20 | HRGMv2_2451_20_41 | 47172 | 48950 | - | 3.A.1.21.1 |
| STP | HRGMv2_2451_20 | HRGMv2_2451_20_42 | 49088 | 49714 | - | TetR_N |
| CAZyme | HRGMv2_2451_20 | HRGMv2_2451_20_43 | 49821 | 50795 | - | GH26 |
Gene ID: HRGMv2_2451_20_40
Type: TC
Location: 45428 - 47179 (-)
Type: TC
Location: 45428 - 47179 (-)
Gene ID: HRGMv2_2451_20_41
Type: TC
Location: 47172 - 48950 (-)
Type: TC
Location: 47172 - 48950 (-)
Gene ID: HRGMv2_2451_20_42
Type: STP
Location: 49088 - 49714 (-)
Type: STP
Location: 49088 - 49714 (-)
Gene ID: HRGMv2_2451_20_43
Type: CAZyme
Location: 49821 - 50795 (-)
Type: CAZyme
Location: 49821 - 50795 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.