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Cluster: HRGMv2_2451_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2451_1 HRGMv2_2451_1_96 119358 119990 + 3.A.1.124.6
pfam HRGMv2_2451_1 HRGMv2_2451_1_97 120125 121042 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_98 121111 122271 + GT4
TF HRGMv2_2451_1 HRGMv2_2451_1_99 122393 123481 + Fez1
STP HRGMv2_2451_1 HRGMv2_2451_1_100 123604 124926 + AraC_binding
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_101 125102 126010 + GT2
TC HRGMv2_2451_1 HRGMv2_2451_1_102 126018 126797 + 3.A.1.103.4
TC HRGMv2_2451_1 HRGMv2_2451_1_103 126797 128098 + 3.A.1.103.4
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_104 128112 131420 + GT2
Gene ID: HRGMv2_2451_1_96
Type: TC
Location: 119358 - 119990 (+)
Gene ID: HRGMv2_2451_1_97
Type: pfam
Location: 120125 - 121042 (+)
Gene ID: HRGMv2_2451_1_98
Type: CAZyme
Location: 121111 - 122271 (+)
Gene ID: HRGMv2_2451_1_99
Type: TF
Location: 122393 - 123481 (+)
Gene ID: HRGMv2_2451_1_100
Type: STP
Location: 123604 - 124926 (+)
Gene ID: HRGMv2_2451_1_101
Type: CAZyme
Location: 125102 - 126010 (+)
Gene ID: HRGMv2_2451_1_102
Type: TC
Location: 126018 - 126797 (+)
Gene ID: HRGMv2_2451_1_103
Type: TC
Location: 126797 - 128098 (+)
Gene ID: HRGMv2_2451_1_104
Type: CAZyme
Location: 128112 - 131420 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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