Cluster: HRGMv2_2451_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- CGC Family ID: CGCFAM_00204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2451_51 | HRGMv2_2451_51_10 | 10962 | 11723 | + | GH23 |
| TF | HRGMv2_2451_51 | HRGMv2_2451_51_11 | 11921 | 12307 | + | GntR |
| TC | HRGMv2_2451_51 | HRGMv2_2451_51_12 | 12482 | 13360 | + | 3.A.1.149.1 |
Gene ID: HRGMv2_2451_51_10
Type: CAZyme
Location: 10962 - 11723 (+)
Type: CAZyme
Location: 10962 - 11723 (+)
Gene ID: HRGMv2_2451_51_11
Type: TF
Location: 11921 - 12307 (+)
Type: TF
Location: 11921 - 12307 (+)
Gene ID: HRGMv2_2451_51_12
Type: TC
Location: 12482 - 13360 (+)
Type: TC
Location: 12482 - 13360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.