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Cluster: HRGMv2_2451_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_51 57895 59490 + GT2
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_52 59593 61230 + GT2
TC HRGMv2_2451_1 HRGMv2_2451_1_53 61293 62228 + 3.A.1.104.1
TC HRGMv2_2451_1 HRGMv2_2451_1_54 62244 63554 + 3.A.1.103.6
pfam HRGMv2_2451_1 HRGMv2_2451_1_55 63568 64482 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_56 64496 67684 + GT2 | GT2
NULL(UNKNOWN) HRGMv2_2451_1 HRGMv2_2451_1_57 67767 67976 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2451_1 HRGMv2_2451_1_58 68011 69147 + Aminotran_1_2
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_59 69173 70132 + GT2
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_60 70135 71088 + GT2
TC HRGMv2_2451_1 HRGMv2_2451_1_61 71239 72603 + 9.B.18.1.1
pfam HRGMv2_2451_1 HRGMv2_2451_1_62 72616 73821 + LytR_cpsA_psr
pfam HRGMv2_2451_1 HRGMv2_2451_1_63 73835 74767 + AA_kinase
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_64 75111 78680 + GH73
peptidase HRGMv2_2451_1 HRGMv2_2451_1_65 78869 81277 + C01.UPA
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_66 81376 82383 + GT2
Gene ID: HRGMv2_2451_1_51
Type: CAZyme
Location: 57895 - 59490 (+)
Gene ID: HRGMv2_2451_1_52
Type: CAZyme
Location: 59593 - 61230 (+)
Gene ID: HRGMv2_2451_1_53
Type: TC
Location: 61293 - 62228 (+)
Gene ID: HRGMv2_2451_1_54
Type: TC
Location: 62244 - 63554 (+)
Gene ID: HRGMv2_2451_1_55
Type: pfam
Location: 63568 - 64482 (+)
Gene ID: HRGMv2_2451_1_56
Type: CAZyme
Location: 64496 - 67684 (+)
Gene ID: HRGMv2_2451_1_57
Type:
Location: 67767 - 67976 (+)
Gene ID: HRGMv2_2451_1_58
Type: STP
Location: 68011 - 69147 (+)
Gene ID: HRGMv2_2451_1_59
Type: CAZyme
Location: 69173 - 70132 (+)
Gene ID: HRGMv2_2451_1_60
Type: CAZyme
Location: 70135 - 71088 (+)
Gene ID: HRGMv2_2451_1_61
Type: TC
Location: 71239 - 72603 (+)
Gene ID: HRGMv2_2451_1_62
Type: pfam
Location: 72616 - 73821 (+)
Gene ID: HRGMv2_2451_1_63
Type: pfam
Location: 73835 - 74767 (+)
Gene ID: HRGMv2_2451_1_64
Type: CAZyme
Location: 75111 - 78680 (+)
Gene ID: HRGMv2_2451_1_65
Type: peptidase
Location: 78869 - 81277 (+)
Gene ID: HRGMv2_2451_1_66
Type: CAZyme
Location: 81376 - 82383 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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