Cluster: HRGMv2_2451_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2451
- CGC Family ID: CGCFAM_00047
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2451_1 | HRGMv2_2451_1_77 | 98587 | 101022 | - | GH94 |
| TF | HRGMv2_2451_1 | HRGMv2_2451_1_78 | 101647 | 102660 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_2451_1 | HRGMv2_2451_1_79 | 102701 | 104146 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2451_1 | HRGMv2_2451_1_80 | 104305 | 105252 | + | 3.A.1.1.4 |
| TC | HRGMv2_2451_1 | HRGMv2_2451_1_81 | 105259 | 106158 | + | 3.A.1.1.36 |
| STP | HRGMv2_2451_1 | HRGMv2_2451_1_82 | 106396 | 108117 | + | HATPase_c | HisKA | Response_reg |
| CAZyme | HRGMv2_2451_1 | HRGMv2_2451_1_83 | 108202 | 109023 | + | CE4 |
Gene ID: HRGMv2_2451_1_77
Type: CAZyme
Location: 98587 - 101022 (-)
Type: CAZyme
Location: 98587 - 101022 (-)
Gene ID: HRGMv2_2451_1_78
Type: TF
Location: 101647 - 102660 (+)
Type: TF
Location: 101647 - 102660 (+)
Gene ID: HRGMv2_2451_1_79
Type:
Location: 102701 - 104146 (+)
Type:
Location: 102701 - 104146 (+)
Gene ID: HRGMv2_2451_1_80
Type: TC
Location: 104305 - 105252 (+)
Type: TC
Location: 104305 - 105252 (+)
Gene ID: HRGMv2_2451_1_81
Type: TC
Location: 105259 - 106158 (+)
Type: TC
Location: 105259 - 106158 (+)
Gene ID: HRGMv2_2451_1_82
Type: STP
Location: 106396 - 108117 (+)
Type: STP
Location: 106396 - 108117 (+)
Gene ID: HRGMv2_2451_1_83
Type: CAZyme
Location: 108202 - 109023 (+)
Type: CAZyme
Location: 108202 - 109023 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.