Cluster: HRGMv2_2451_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2451
- CGC Family ID: CGCFAM_00411
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2451_3 | HRGMv2_2451_3_7 | 6372 | 7733 | + | 9.A.40.2.1 |
| peptidase | HRGMv2_2451_3 | HRGMv2_2451_3_8 | 7826 | 8554 | + | M20.UNW |
| NULL(UNKNOWN) | HRGMv2_2451_3 | HRGMv2_2451_3_9 | 8693 | 9538 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2451_3 | HRGMv2_2451_3_10 | 9572 | 11023 | + | GT5 |
| peptidase | HRGMv2_2451_3 | HRGMv2_2451_3_11 | 11125 | 11841 | + | S14.UPW |
| pfam | HRGMv2_2451_3 | HRGMv2_2451_3_12 | 12103 | 12981 | + | BacA |
| TC | HRGMv2_2451_3 | HRGMv2_2451_3_13 | 13148 | 16021 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2451_3_7
Type: TC
Location: 6372 - 7733 (+)
Type: TC
Location: 6372 - 7733 (+)
Gene ID: HRGMv2_2451_3_8
Type: peptidase
Location: 7826 - 8554 (+)
Type: peptidase
Location: 7826 - 8554 (+)
Gene ID: HRGMv2_2451_3_9
Type:
Location: 8693 - 9538 (+)
Type:
Location: 8693 - 9538 (+)
Gene ID: HRGMv2_2451_3_10
Type: CAZyme
Location: 9572 - 11023 (+)
Type: CAZyme
Location: 9572 - 11023 (+)
Gene ID: HRGMv2_2451_3_11
Type: peptidase
Location: 11125 - 11841 (+)
Type: peptidase
Location: 11125 - 11841 (+)
Gene ID: HRGMv2_2451_3_12
Type: pfam
Location: 12103 - 12981 (+)
Type: pfam
Location: 12103 - 12981 (+)
Gene ID: HRGMv2_2451_3_13
Type: TC
Location: 13148 - 16021 (+)
Type: TC
Location: 13148 - 16021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.