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Cluster: HRGMv2_2451_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2451_1 HRGMv2_2451_1_21 23064 26075 + 1.C.39.4.6
pfam HRGMv2_2451_1 HRGMv2_2451_1_22 26412 26663 + TusA
TC HRGMv2_2451_1 HRGMv2_2451_1_23 26693 27523 + 3.A.25.2.1
peptidase HRGMv2_2451_1 HRGMv2_2451_1_24 27517 27927 + M67.UPB
TC HRGMv2_2451_1 HRGMv2_2451_1_25 28185 29558 + 9.B.18.1.3
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_26 29569 30375 + GT2
TC HRGMv2_2451_1 HRGMv2_2451_1_27 30445 31221 + 3.A.1.103.4
TC HRGMv2_2451_1 HRGMv2_2451_1_28 31344 32084 + 3.A.1.103.5
pfam HRGMv2_2451_1 HRGMv2_2451_1_29 32104 33228 + Acyl_transf_3
CAZyme HRGMv2_2451_1 HRGMv2_2451_1_30 33290 34387 + GT4
Gene ID: HRGMv2_2451_1_21
Type: TC
Location: 23064 - 26075 (+)
Gene ID: HRGMv2_2451_1_22
Type: pfam
Location: 26412 - 26663 (+)
Gene ID: HRGMv2_2451_1_23
Type: TC
Location: 26693 - 27523 (+)
Gene ID: HRGMv2_2451_1_24
Type: peptidase
Location: 27517 - 27927 (+)
Gene ID: HRGMv2_2451_1_25
Type: TC
Location: 28185 - 29558 (+)
Gene ID: HRGMv2_2451_1_26
Type: CAZyme
Location: 29569 - 30375 (+)
Gene ID: HRGMv2_2451_1_27
Type: TC
Location: 30445 - 31221 (+)
Gene ID: HRGMv2_2451_1_28
Type: TC
Location: 31344 - 32084 (+)
Gene ID: HRGMv2_2451_1_29
Type: pfam
Location: 32104 - 33228 (+)
Gene ID: HRGMv2_2451_1_30
Type: CAZyme
Location: 33290 - 34387 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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