Genome Details
Selected Rep_genome_ID: HRGMv2_2299
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG417_bin.97 | 2,570,698 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2299 | 2,697,058 | 99.32% | 0% | Tanzania | Africa | HRGM |
| MGYG000004382 | 2,786,990 | 98.66% | 0% | Israel | Asia | UHGG |
| Rep_2379 | 2,941,142 | 96.6443% | 2.01342% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2299_CGC13 | CGCFAM_00002 | Yes | 3 | 1 | |
| HRGMv2_2299_CGC15 | CGCFAM_00002 | Yes | 9 | 5 | |
| HRGMv2_2299_CGC12 | CGCFAM_00053 | Yes | 11 | 2 | |
| HRGMv2_2299_CGC6 | CGCFAM_00064 | Yes | 6 | 3 | |
| HRGMv2_2299_CGC8 | CGCFAM_00179 | Yes | 3 | 1 | |
| HRGMv2_2299_CGC22 | CGCFAM_00460 | Yes | 4 | 1 | |
| HRGMv2_2299_CGC19 | CGCFAM_00694 | Yes | 4 | 1 | |
| HRGMv2_2299_CGC1 | CGCFAM_01164 | Yes | 5 | 1 | |
| HRGMv2_2299_CGC10 | CGCFAM_01352 | Yes | 3 | 1 | |
| HRGMv2_2299_CGC24 | CGCFAM_01352 | Yes | 4 | 1 | |
| HRGMv2_2299_CGC3 | CGCFAM_01447 | Yes | 4 | 1 | |
| HRGMv2_2299_CGC20 | CGCFAM_01631 | Yes | 4 | 1 | |
| HRGMv2_2299_CGC7 | CGCFAM_07611 | Yes | 5 | 1 |
Top CAZyme Families