Cluster: HRGMv2_2299_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2299
- CGC Family ID: CGCFAM_00064
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2299_3 | HRGMv2_2299_3_56 | 57908 | 59311 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_2299_3 | HRGMv2_2299_3_57 | 59314 | 60282 | - | GT2 |
| CAZyme | HRGMv2_2299_3 | HRGMv2_2299_3_58 | 60279 | 61919 | - | GT2 |
| CAZyme | HRGMv2_2299_3 | HRGMv2_2299_3_59 | 61963 | 65988 | - | GT2 | GT2 |
| TC | HRGMv2_2299_3 | HRGMv2_2299_3_60 | 66002 | 67282 | - | 3.A.1.103.6 |
| TC | HRGMv2_2299_3 | HRGMv2_2299_3_61 | 67312 | 68112 | - | 3.A.1.104.1 |
Gene ID: HRGMv2_2299_3_56
Type: TC
Location: 57908 - 59311 (-)
Type: TC
Location: 57908 - 59311 (-)
Gene ID: HRGMv2_2299_3_57
Type: CAZyme
Location: 59314 - 60282 (-)
Type: CAZyme
Location: 59314 - 60282 (-)
Gene ID: HRGMv2_2299_3_58
Type: CAZyme
Location: 60279 - 61919 (-)
Type: CAZyme
Location: 60279 - 61919 (-)
Gene ID: HRGMv2_2299_3_59
Type: CAZyme
Location: 61963 - 65988 (-)
Type: CAZyme
Location: 61963 - 65988 (-)
Gene ID: HRGMv2_2299_3_60
Type: TC
Location: 66002 - 67282 (-)
Type: TC
Location: 66002 - 67282 (-)
Gene ID: HRGMv2_2299_3_61
Type: TC
Location: 67312 - 68112 (-)
Type: TC
Location: 67312 - 68112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.