Cluster: HRGMv2_2299_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- CGC Family ID: CGCFAM_01164
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2299_1 | HRGMv2_2299_1_24 | 26197 | 27855 | - | GH13_5 |
| pfam | HRGMv2_2299_1 | HRGMv2_2299_1_25 | 27891 | 29309 | - | DUF4340 | DUF4340 |
| pfam | HRGMv2_2299_1 | HRGMv2_2299_1_26 | 29309 | 30769 | - | ABC_transp_aux | DUF7088 |
| TC | HRGMv2_2299_1 | HRGMv2_2299_1_27 | 30781 | 31644 | - | 3.A.1.132.1 |
| TC | HRGMv2_2299_1 | HRGMv2_2299_1_28 | 31644 | 32687 | - | 3.A.1.132.1 |
Gene ID: HRGMv2_2299_1_24
Type: CAZyme
Location: 26197 - 27855 (-)
Type: CAZyme
Location: 26197 - 27855 (-)
Gene ID: HRGMv2_2299_1_25
Type: pfam
Location: 27891 - 29309 (-)
Type: pfam
Location: 27891 - 29309 (-)
Gene ID: HRGMv2_2299_1_26
Type: pfam
Location: 29309 - 30769 (-)
Type: pfam
Location: 29309 - 30769 (-)
Gene ID: HRGMv2_2299_1_27
Type: TC
Location: 30781 - 31644 (-)
Type: TC
Location: 30781 - 31644 (-)
Gene ID: HRGMv2_2299_1_28
Type: TC
Location: 31644 - 32687 (-)
Type: TC
Location: 31644 - 32687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.