Cluster: HRGMv2_2299_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- CGC Family ID: CGCFAM_07611
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2299_4 | HRGMv2_2299_4_26 | 30180 | 32723 | + | CBM48 | GH13_9 |
| TC | HRGMv2_2299_4 | HRGMv2_2299_4_27 | 32723 | 33640 | + | 1.A.23.2.2 |
| NULL(UNKNOWN) | HRGMv2_2299_4 | HRGMv2_2299_4_28 | 33721 | 34983 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2299_4 | HRGMv2_2299_4_29 | 35062 | 35715 | + | MecA |
| TC | HRGMv2_2299_4 | HRGMv2_2299_4_30 | 35771 | 37318 | + | 3.A.18.1.1 |
Gene ID: HRGMv2_2299_4_26
Type: CAZyme
Location: 30180 - 32723 (+)
Type: CAZyme
Location: 30180 - 32723 (+)
Gene ID: HRGMv2_2299_4_27
Type: TC
Location: 32723 - 33640 (+)
Type: TC
Location: 32723 - 33640 (+)
Gene ID: HRGMv2_2299_4_28
Type:
Location: 33721 - 34983 (+)
Type:
Location: 33721 - 34983 (+)
Gene ID: HRGMv2_2299_4_29
Type: pfam
Location: 35062 - 35715 (+)
Type: pfam
Location: 35062 - 35715 (+)
Gene ID: HRGMv2_2299_4_30
Type: TC
Location: 35771 - 37318 (+)
Type: TC
Location: 35771 - 37318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.