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Cluster: HRGMv2_2299_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2299_6 HRGMv2_2299_6_130 119036 119914 - GT2
CAZyme HRGMv2_2299_6 HRGMv2_2299_6_131 119934 120965 - GT2
CAZyme HRGMv2_2299_6 HRGMv2_2299_6_132 120958 122127 - GT4
TC HRGMv2_2299_6 HRGMv2_2299_6_133 122171 123589 - 9.B.18.1.2
pfam HRGMv2_2299_6 HRGMv2_2299_6_134 123963 125462 + LytR_cpsA_psr
CAZyme HRGMv2_2299_6 HRGMv2_2299_6_135 125570 127390 + GT39
pfam HRGMv2_2299_6 HRGMv2_2299_6_136 127458 128222 - Endonuclease_NS | Endonuclea_NS_2
CAZyme HRGMv2_2299_6 HRGMv2_2299_6_137 128574 130679 - CBM34 | GH13_39
TC HRGMv2_2299_6 HRGMv2_2299_6_138 131068 132912 - 3.A.16.1.1
Gene ID: HRGMv2_2299_6_130
Type: CAZyme
Location: 119036 - 119914 (-)
Gene ID: HRGMv2_2299_6_131
Type: CAZyme
Location: 119934 - 120965 (-)
Gene ID: HRGMv2_2299_6_132
Type: CAZyme
Location: 120958 - 122127 (-)
Gene ID: HRGMv2_2299_6_133
Type: TC
Location: 122171 - 123589 (-)
Gene ID: HRGMv2_2299_6_134
Type: pfam
Location: 123963 - 125462 (+)
Gene ID: HRGMv2_2299_6_135
Type: CAZyme
Location: 125570 - 127390 (+)
Gene ID: HRGMv2_2299_6_136
Type: pfam
Location: 127458 - 128222 (-)
Gene ID: HRGMv2_2299_6_137
Type: CAZyme
Location: 128574 - 130679 (-)
Gene ID: HRGMv2_2299_6_138
Type: TC
Location: 131068 - 132912 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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