Cluster: HRGMv2_2299_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- CGC Family ID: CGCFAM_01631
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2299_12 | HRGMv2_2299_12_37 | 37906 | 38598 | - | 2.A.122.1.4 |
| TC | HRGMv2_2299_12 | HRGMv2_2299_12_38 | 38591 | 38953 | - | 1.E.14.1.17 |
| pfam | HRGMv2_2299_12 | HRGMv2_2299_12_39 | 38998 | 39783 | - | Ubie_methyltran | TehB | MTS | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | HRGMv2_2299_12 | HRGMv2_2299_12_40 | 39798 | 40718 | - | CE4 |
Gene ID: HRGMv2_2299_12_37
Type: TC
Location: 37906 - 38598 (-)
Type: TC
Location: 37906 - 38598 (-)
Gene ID: HRGMv2_2299_12_38
Type: TC
Location: 38591 - 38953 (-)
Type: TC
Location: 38591 - 38953 (-)
Gene ID: HRGMv2_2299_12_39
Type: pfam
Location: 38998 - 39783 (-)
Type: pfam
Location: 38998 - 39783 (-)
Gene ID: HRGMv2_2299_12_40
Type: CAZyme
Location: 39798 - 40718 (-)
Type: CAZyme
Location: 39798 - 40718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.