Cluster: HRGMv2_2299_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- CGC Family ID: CGCFAM_00460
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2299_15 | HRGMv2_2299_15_12 | 18608 | 19285 | - | CE4 |
| pfam | HRGMv2_2299_15 | HRGMv2_2299_15_13 | 19564 | 19749 | + | DUF4250 |
| TF | HRGMv2_2299_15 | HRGMv2_2299_15_14 | 19811 | 20173 | - | HTH_5 |
| TC | HRGMv2_2299_15 | HRGMv2_2299_15_15 | 20201 | 22783 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_2299_15_12
Type: CAZyme
Location: 18608 - 19285 (-)
Type: CAZyme
Location: 18608 - 19285 (-)
Gene ID: HRGMv2_2299_15_13
Type: pfam
Location: 19564 - 19749 (+)
Type: pfam
Location: 19564 - 19749 (+)
Gene ID: HRGMv2_2299_15_14
Type: TF
Location: 19811 - 20173 (-)
Type: TF
Location: 19811 - 20173 (-)
Gene ID: HRGMv2_2299_15_15
Type: TC
Location: 20201 - 22783 (-)
Type: TC
Location: 20201 - 22783 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.