Cluster: HRGMv2_2299_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2299
- CGC Family ID: CGCFAM_01352
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2299_16 | HRGMv2_2299_16_34 | 43257 | 44252 | - | 3.A.1.15.3 |
| TF | HRGMv2_2299_16 | HRGMv2_2299_16_35 | 44245 | 44688 | - | FUR |
| pfam | HRGMv2_2299_16 | HRGMv2_2299_16_36 | 44881 | 46737 | + | Lipase_GDSL_2 |
| CAZyme | HRGMv2_2299_16 | HRGMv2_2299_16_37 | 46734 | 47774 | + | GT2 |
Gene ID: HRGMv2_2299_16_34
Type: TC
Location: 43257 - 44252 (-)
Type: TC
Location: 43257 - 44252 (-)
Gene ID: HRGMv2_2299_16_35
Type: TF
Location: 44245 - 44688 (-)
Type: TF
Location: 44245 - 44688 (-)
Gene ID: HRGMv2_2299_16_36
Type: pfam
Location: 44881 - 46737 (+)
Type: pfam
Location: 44881 - 46737 (+)
Gene ID: HRGMv2_2299_16_37
Type: CAZyme
Location: 46734 - 47774 (+)
Type: CAZyme
Location: 46734 - 47774 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2821
Species
UBA2821 sp902763335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.