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Genome Details

Selected Rep_genome_ID: HRGMv2_2041
Total Genomes Found: 43
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A137.bin_10 2,909,218 98.63% 0% China(Inner Mongolia) Asia IMGG
BF108_bin.29_sub 2,512,193 93.25% 1.38% NA Africa H3AfricaPhase2
CGMR101000 2,717,891 96.41% 0% China Asia CGMR
HRGMv2_2041 3,024,256 98.94% 0% South Korea Asia HRGM
Rep_2249 3,604,923 98.3122% 0.632911% NA NA WIS
SPMP03_bin.117 3,130,115 97.68% 1.27% Singapore Asia SPMP
SPMP04_bin.70 3,056,022 95.62% 1.27% Singapore Asia SPMP
SPMP05_bin.57 3,178,021 97.52% 2.09% Singapore Asia SPMP
SPMP06_bin.116 2,924,512 91.14% 1.29% Singapore Asia SPMP
SPMP104_bin.5 2,876,693 96.24% 1.27% Singapore Asia SPMP
SPMP107_bin.67 3,215,426 98.73% 2.32% Singapore Asia SPMP
SPMP109_bin.20 3,100,374 95.55% 0.79% Singapore Asia SPMP
SPMP11_bin.57 3,151,559 97.36% 2.53% Singapore Asia SPMP
SPMP14_bin.90 3,368,032 97.68% 3.8% Singapore Asia SPMP
SPMP16_bin.83 3,223,663 97.05% 4.43% Singapore Asia SPMP
SPMP20_bin.64 3,327,031 98.31% 0% Singapore Asia SPMP
SPMP24_bin.26 3,065,524 95.46% 2.22% Singapore Asia SPMP
SPMP28_bin.13 3,197,147 91.49% 0.63% Singapore Asia SPMP
SPMP29_bin.58 3,198,438 95.46% 0.63% Singapore Asia SPMP
SPMP30_bin.101 3,120,800 96.41% 1.27% Singapore Asia SPMP
SPMP31_bin.171 2,938,677 96.08% 0.63% Singapore Asia SPMP
SPMP36_bin.21 3,118,033 96.89% 2.22% Singapore Asia SPMP
SPMP37_bin.33 3,149,814 98.31% 4.43% Singapore Asia SPMP
SPMP38_bin.104 2,927,269 94.51% 4.43% Singapore Asia SPMP
SPMP39_bin.96 3,262,564 96.73% 1.27% Singapore Asia SPMP
SPMP42_bin.5 3,252,022 90.59% 1.37% Singapore Asia SPMP
SPMP43_bin.42 3,178,410 98.1% 0.63% Singapore Asia SPMP
SPMP44_bin.149 3,098,391 97.36% 0.63% Singapore Asia SPMP
SPMP45_bin.184 3,443,643 98.29% 3.38% Singapore Asia SPMP
SPMP46_bin.40 3,207,535 96.15% 3.8% Singapore Asia SPMP
SPMP54_bin.14 3,030,096 97.05% 2.53% Singapore Asia SPMP
SPMP56_bin.5 3,436,956 95.29% 0.63% Singapore Asia SPMP
SPMP63_bin.49 3,272,169 94.51% 0.63% Singapore Asia SPMP
SPMP64_bin.34 3,328,548 96.46% 0.63% Singapore Asia SPMP
SPMP67_bin.17 2,996,652 93.54% 1.27% Singapore Asia SPMP
SPMP71_bin.10 3,217,654 91.86% 3.16% Singapore Asia SPMP
SPMP74_bin.55 2,897,780 92.67% 0.63% Singapore Asia SPMP
SPMP80_bin.78 3,121,359 96.52% 3.8% Singapore Asia SPMP
SPMP83_bin.73 3,010,114 98.31% 0.32% Singapore Asia SPMP
SPMP88_bin.48 3,524,307 97.18% 2.53% Singapore Asia SPMP
SPMP89_bin.44 3,028,750 97.68% 0.63% Singapore Asia SPMP
SPMP92_bin.39 3,114,418 95.78% 2.53% Singapore Asia SPMP
SW147_98 2,894,376 98.95% 0.63% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2041_CGC22 CGCFAM_00006 Yes 16 7
HRGMv2_2041_CGC17 CGCFAM_00010 Yes 5 2 alpha-glucan
HRGMv2_2041_CGC8 CGCFAM_00032 Yes 4 2
HRGMv2_2041_CGC40 CGCFAM_00035 Yes 4 2 fructan
HRGMv2_2041_CGC43 CGCFAM_00351 Yes 6 3
HRGMv2_2041_CGC6 CGCFAM_00738 Yes 3 1
HRGMv2_2041_CGC32 CGCFAM_00818 Yes 7 3
HRGMv2_2041_CGC47 CGCFAM_01098 Yes 8 2
HRGMv2_2041_CGC46 CGCFAM_01924 Yes 12 7
HRGMv2_2041_CGC45 CGCFAM_03444 Yes 5 1
HRGMv2_2041_CGC38 CGCFAM_04892 Yes 3 2
HRGMv2_2041_CGC4 CGCFAM_05925 Yes 6 2
HRGMv2_2041_CGC48 CGCFAM_06559 Yes 6 2
HRGMv2_2041_CGC18 CGCFAM_06807 Yes 17 1
HRGMv2_2041_CGC42 CGCFAM_09452 Yes 5 3
HRGMv2_2041_CGC29 CGCFAM_09453 Yes 7 1
HRGMv2_2041_CGC7 CGCFAM_09455 Yes 7 3
HRGMv2_2041_CGC1 CGCFAM_09459 Yes 11 1
HRGMv2_2041_CGC20 CGCFAM_09460 Yes 3 1
HRGMv2_2041_CGC2 CGCFAM_09940 Yes 5 1
HRGMv2_2041_CGC39 CGCFAM_09941 Yes 9 2
Top CAZyme Families