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Cluster: HRGMv2_2041_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2041_6 HRGMv2_2041_6_83 113718 114647 + 3.A.1.1.10
TC HRGMv2_2041_6 HRGMv2_2041_6_84 114660 115580 + 3.A.1.1.29
STP HRGMv2_2041_6 HRGMv2_2041_6_85 115791 117374 + SBP_bac_1
TF HRGMv2_2041_6 HRGMv2_2041_6_86 117563 118537 + LacI
CAZyme HRGMv2_2041_6 HRGMv2_2041_6_87 118559 120280 + GH53
CAZyme HRGMv2_2041_6 HRGMv2_2041_6_88 120285 122351 + GH35
CAZyme HRGMv2_2041_6 HRGMv2_2041_6_89 122372 124366 + GH42
Gene ID: HRGMv2_2041_6_83
Type: TC
Location: 113718 - 114647 (+)
Gene ID: HRGMv2_2041_6_84
Type: TC
Location: 114660 - 115580 (+)
Gene ID: HRGMv2_2041_6_85
Type: STP
Location: 115791 - 117374 (+)
Gene ID: HRGMv2_2041_6_86
Type: TF
Location: 117563 - 118537 (+)
Gene ID: HRGMv2_2041_6_87
Type: CAZyme
Location: 118559 - 120280 (+)
Gene ID: HRGMv2_2041_6_88
Type: CAZyme
Location: 120285 - 122351 (+)
Gene ID: HRGMv2_2041_6_89
Type: CAZyme
Location: 122372 - 124366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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