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Cluster: HRGMv2_2041_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_30 28192 29205 - GH18
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_31 29233 30522 - GH29
STP HRGMv2_2041_18 HRGMv2_2041_18_32 30716 32356 - SBP_bac_1
TC HRGMv2_2041_18 HRGMv2_2041_18_33 32495 33424 - 3.A.1.1.29
TC HRGMv2_2041_18 HRGMv2_2041_18_34 33439 34374 - 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_2041_18 HRGMv2_2041_18_35 34582 34776 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_36 34830 37070 - GH3
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_37 37288 38355 + CBM9
TF HRGMv2_2041_18 HRGMv2_2041_18_38 38407 39429 + LacI
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_39 39562 42672 - GH38
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_40 42788 43777 - GH130_2
CAZyme HRGMv2_2041_18 HRGMv2_2041_18_41 43993 45864 - GH20
Gene ID: HRGMv2_2041_18_30
Type: CAZyme
Location: 28192 - 29205 (-)
Gene ID: HRGMv2_2041_18_31
Type: CAZyme
Location: 29233 - 30522 (-)
Gene ID: HRGMv2_2041_18_32
Type: STP
Location: 30716 - 32356 (-)
Gene ID: HRGMv2_2041_18_33
Type: TC
Location: 32495 - 33424 (-)
Gene ID: HRGMv2_2041_18_34
Type: TC
Location: 33439 - 34374 (-)
Gene ID: HRGMv2_2041_18_35
Type:
Location: 34582 - 34776 (-)
Gene ID: HRGMv2_2041_18_36
Type: CAZyme
Location: 34830 - 37070 (-)
Gene ID: HRGMv2_2041_18_37
Type: CAZyme
Location: 37288 - 38355 (+)
Gene ID: HRGMv2_2041_18_38
Type: TF
Location: 38407 - 39429 (+)
Gene ID: HRGMv2_2041_18_39
Type: CAZyme
Location: 39562 - 42672 (-)
Gene ID: HRGMv2_2041_18_40
Type: CAZyme
Location: 42788 - 43777 (-)
Gene ID: HRGMv2_2041_18_41
Type: CAZyme
Location: 43993 - 45864 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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