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Cluster: HRGMv2_2041_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2041_6 HRGMv2_2041_6_10 12090 13304 + 1.A.11.2.7
pfam HRGMv2_2041_6 HRGMv2_2041_6_11 13335 13673 + P-II
TC HRGMv2_2041_6 HRGMv2_2041_6_12 13770 14123 + 3.A.1.5.25
TC HRGMv2_2041_6 HRGMv2_2041_6_13 14162 14488 + 3.A.1.5.18
TC HRGMv2_2041_6 HRGMv2_2041_6_14 14494 16173 + 3.A.1.5.15
NULL(UNKNOWN) HRGMv2_2041_6 HRGMv2_2041_6_15 16489 17094 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2041_6 HRGMv2_2041_6_16 17327 19471 + GH3
Gene ID: HRGMv2_2041_6_10
Type: TC
Location: 12090 - 13304 (+)
Gene ID: HRGMv2_2041_6_11
Type: pfam
Location: 13335 - 13673 (+)
Gene ID: HRGMv2_2041_6_12
Type: TC
Location: 13770 - 14123 (+)
Gene ID: HRGMv2_2041_6_13
Type: TC
Location: 14162 - 14488 (+)
Gene ID: HRGMv2_2041_6_14
Type: TC
Location: 14494 - 16173 (+)
Gene ID: HRGMv2_2041_6_15
Type:
Location: 16489 - 17094 (+)
Gene ID: HRGMv2_2041_6_16
Type: CAZyme
Location: 17327 - 19471 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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