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Cluster: HRGMv2_2041_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2041_13 HRGMv2_2041_13_34 38041 38652 + 2.A.88.6.1
CAZyme HRGMv2_2041_13 HRGMv2_2041_13_35 38806 40815 - GH127
TF HRGMv2_2041_13 HRGMv2_2041_13_36 41005 41937 + HTH_AraC | HTH_AraC
TC HRGMv2_2041_13 HRGMv2_2041_13_37 42299 45397 - 9.B.74.1.4
STP HRGMv2_2041_13 HRGMv2_2041_13_38 45749 46441 + TetR_N
pfam HRGMv2_2041_13 HRGMv2_2041_13_39 46505 47278 - Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_2041_13 HRGMv2_2041_13_40 47630 48550 + 8.A.5.1.7
CAZyme HRGMv2_2041_13 HRGMv2_2041_13_41 48854 50854 - GH31_4
TC HRGMv2_2041_13 HRGMv2_2041_13_42 51129 51821 - 1.C.82.1.1
Gene ID: HRGMv2_2041_13_34
Type: TC
Location: 38041 - 38652 (+)
Gene ID: HRGMv2_2041_13_35
Type: CAZyme
Location: 38806 - 40815 (-)
Gene ID: HRGMv2_2041_13_36
Type: TF
Location: 41005 - 41937 (+)
Gene ID: HRGMv2_2041_13_37
Type: TC
Location: 42299 - 45397 (-)
Gene ID: HRGMv2_2041_13_38
Type: STP
Location: 45749 - 46441 (+)
Gene ID: HRGMv2_2041_13_39
Type: pfam
Location: 46505 - 47278 (-)
Gene ID: HRGMv2_2041_13_40
Type: TC
Location: 47630 - 48550 (+)
Gene ID: HRGMv2_2041_13_41
Type: CAZyme
Location: 48854 - 50854 (-)
Gene ID: HRGMv2_2041_13_42
Type: TC
Location: 51129 - 51821 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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